roadrunner
2.6.0
Fast simulator for SBML models
rr
NewtonIteration
rr::NewtonIteration Member List
This is the complete list of members for
rr::NewtonIteration
, including all inherited members.
addSetting
(const std::string &name, const Setting &val, const std::string &display_name, const std::string &hint, const std::string &description) (defined in
rr::Solver
)
rr::Solver
protected
constraints
rr::KinsolSteadyStateSolver
protected
construct
(ExecutableModel *model) const =0
rr::Registrable
pure virtual
createKinsol
() override
rr::NewtonIteration
protected
virtual
DescriptionMap
typedef (defined in
rr::Solver
)
rr::Solver
descriptions
(defined in
rr::Solver
)
rr::Solver
display_names_
(defined in
rr::Solver
)
rr::Solver
DisplayNameMap
typedef (defined in
rr::Solver
)
rr::Solver
freeKinsol
() override
rr::NewtonIteration
protected
virtual
fscale
rr::KinsolSteadyStateSolver
protected
funcNorm
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
getDescription
() const override
rr::NewtonIteration
virtual
rr::KinsolSteadyStateSolver::getDescription
(const std::string &key) const
rr::Solver
rr::KinsolSteadyStateSolver::getDescription
() const=0
rr::Solver
getDisplayName
(const std::string &key) const
rr::Solver
getHint
() const override
rr::NewtonIteration
virtual
rr::KinsolSteadyStateSolver::getHint
(const std::string &key) const
rr::Solver
rr::KinsolSteadyStateSolver::getHint
() const=0
rr::Solver
getKinsolMemory
() const
rr::KinsolSteadyStateSolver
getModel
() const
rr::Solver
virtual
getName
() const override
rr::NewtonIteration
virtual
rr::KinsolSteadyStateSolver::getName
() const=0
rr::Solver
getNumParams
() const
rr::Solver
virtual
getParamDesc
(int n) const
rr::Solver
virtual
getParamDisplayName
(int n) const
rr::Solver
virtual
getParamHint
(int n) const
rr::Solver
virtual
getParamName
(size_t n) const
rr::Solver
virtual
getSettings
() const
rr::Solver
getSettingsMap
()
rr::Solver
getSettingsRepr
() const
rr::Solver
virtual
getSolverStats
()
rr::KinsolSteadyStateSolver
getSolverStatsFromKinsol
() override
rr::NewtonIteration
virtual
getType
(const std::string &key) const
rr::Solver
getValue
(const std::string &key) const
rr::Solver
virtual
getValueAsString
(const std::string &key)
rr::Solver
virtual
hasValue
(const std::string &key) const
rr::Solver
virtual
HintMap
typedef (defined in
rr::Solver
)
rr::Solver
hints
(defined in
rr::Solver
)
rr::Solver
jac
rr::NewtonIteration
protected
kinsolDyDtFcn
(N_Vector stateVecIn, N_Vector stateVecOut, void *userData)
rr::KinsolSteadyStateSolver
inline
static
KinsolSteadyStateSolver
(ExecutableModel *executableModel)
rr::NewtonIteration
explicit
KinsolSteadyStateSolver
()=default
rr::NewtonIteration
rr::KinsolSteadyStateSolver::KinsolSteadyStateSolver
(ExecutableModel *executableModel)
rr::KinsolSteadyStateSolver
explicit
linearSolver
rr::NewtonIteration
protected
loadConfigSettings
() (defined in
rr::SteadyStateSolver
)
rr::SteadyStateSolver
virtual
mKinsol_Memory
rr::KinsolSteadyStateSolver
protected
mModel
rr::Solver
protected
mStateVector
rr::KinsolSteadyStateSolver
protected
NewtonIteration
(ExecutableModel *executableModel) (defined in
rr::NewtonIteration
)
rr::NewtonIteration
explicit
nSolverIterations
rr::KinsolSteadyStateSolver
protected
numBacktrackOps
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numBetaCondFails
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numFuncEvals
rr::KinsolSteadyStateSolver
protected
numJacEvals
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numJtimesEvals
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numLinConvFails
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numLinFuncEvals
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numLinIters
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numNolinSolvIters
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numNonlinSolvIters
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numPrecEvals
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
numPrecSolves
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
printSolverStats
()
rr::KinsolSteadyStateSolver
resetSettings
() override
rr::NewtonIteration
virtual
setFScale
(double value)
rr::KinsolSteadyStateSolver
setFScale
(const std::vector< double > &value)
rr::KinsolSteadyStateSolver
settings
(defined in
rr::Solver
)
rr::Solver
SettingsList
typedef (defined in
rr::Solver
)
rr::Solver
SettingsMap
typedef (defined in
rr::Solver
)
rr::Solver
settingsPyDictRepr
() const
rr::Solver
virtual
setUScale
(double value)
rr::KinsolSteadyStateSolver
setUScale
(std::vector< double > value)
rr::KinsolSteadyStateSolver
setValue
(const std::string &key, Setting value) (defined in
rr::Solver
)
rr::Solver
virtual
solve
()=0 (defined in
rr::SteadyStateSolver
)
rr::SteadyStateSolver
pure virtual
solveForSteadyState
(KinsolSteadyStateSolver *solverInstance, int kinsolStrategy)
rr::KinsolSteadyStateSolver
solveNewtonIteration
(const std::string &strategy)
rr::NewtonIteration
protected
Solver
()=default (defined in
rr::SteadyStateSolver
)
rr::SteadyStateSolver
Solver
(ExecutableModel *model) (defined in
rr::SteadyStateSolver
)
rr::SteadyStateSolver
explicit
Solver
(ExecutableModel *model) (defined in
rr::Solver
)
rr::Solver
explicit
solverStats
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
sorted_settings
(defined in
rr::Solver
)
rr::Solver
stepLength
(defined in
rr::KinsolSteadyStateSolver
)
rr::KinsolSteadyStateSolver
protected
syncWithModel
(ExecutableModel *m) override
rr::KinsolSteadyStateSolver
virtual
toRepr
() const override
rr::SteadyStateSolver
virtual
toString
() const override
rr::SteadyStateSolver
virtual
updateKinsol
() override
rr::NewtonIteration
protected
virtual
updateSettings
(Dictionary *inputSettings)
rr::Solver
uscale
rr::KinsolSteadyStateSolver
protected
~KinsolSteadyStateSolver
() override=default
rr::KinsolSteadyStateSolver
~NewtonIteration
() override (defined in
rr::NewtonIteration
)
rr::NewtonIteration
~Registrable
()=default (defined in
rr::Registrable
)
rr::Registrable
virtual
~Solver
() override=default (defined in
rr::Solver
)
rr::Solver
~SteadyStateSolver
() override=default (defined in
rr::SteadyStateSolver
)
rr::SteadyStateSolver
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