roadrunner  2.6.0
Fast simulator for SBML models
rrllvm::LLVMModelDataSymbols Member List

This is the complete list of members for rrllvm::LLVMModelDataSymbols, including all inherited members.

BOUNDARY_SPECIES enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
COMPARTMENT enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
EVENT enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
FLOATING_SPECIES enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getAssignmentRuleIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getBoundarySpeciesId(size_t indx) constrrllvm::LLVMModelDataSymbols
getBoundarySpeciesIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getBoundarySpeciesIndex(std::string const &id) constrrllvm::LLVMModelDataSymbols
getBoundarySpeciesInitIndex(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
getBoundarySpeciesSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getCompartmentId(size_t indx) constrrllvm::LLVMModelDataSymbols
getCompartmentIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getCompartmentIndex(std::string const &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getCompartmentIndexForBoundarySpecies(size_t floatIndex) constrrllvm::LLVMModelDataSymbols
getCompartmentIndexForFloatingSpecies(size_t floatIndex) constrrllvm::LLVMModelDataSymbols
getCompartmentInitIndex(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
getCompartmentsSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getConservedMoietyGlobalParameterIndex(uint cmIndex) constrrllvm::LLVMModelDataSymbols
getConservedMoietyId(size_t indx) constrrllvm::LLVMModelDataSymbols
getConservedMoietyIndex(const std::string &name) constrrllvm::LLVMModelDataSymbols
getConservedMoietySize() constrrllvm::LLVMModelDataSymbols
getDepSpeciesIndexForConservedMoietyId(std::string id) constrrllvm::LLVMModelDataSymbols
getEventAttributes() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getEventBufferSize(size_t eventId) constrrllvm::LLVMModelDataSymbols
getEventId(size_t indx) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getEventIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getEventIndex(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getFieldName(ModelDataFields field)rrllvm::LLVMModelDataSymbolsstatic
getFloatingSpeciesId(size_t indx) constrrllvm::LLVMModelDataSymbols
getFloatingSpeciesIds() constrrllvm::LLVMModelDataSymbols
getFloatingSpeciesIndex(std::string const &id, bool requireIndependent=true) constrrllvm::LLVMModelDataSymbols
getFloatingSpeciesInitIndex(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
getFloatingSpeciesSize() constrrllvm::LLVMModelDataSymbols
getGlobalParameterId(size_t indx) constrrllvm::LLVMModelDataSymbols
getGlobalParameterIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getGlobalParameterIndex(std::string const &) constrrllvm::LLVMModelDataSymbols
getGlobalParameterInitIndex(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
getGlobalParametersSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getIndependentBoundarySpeciesSize() constrrllvm::LLVMModelDataSymbols
getIndependentCompartmentSize() constrrllvm::LLVMModelDataSymbols
getIndependentFloatingSpeciesSize() constrrllvm::LLVMModelDataSymbols
getIndependentGlobalParameterSize() constrrllvm::LLVMModelDataSymbols
getIndSpeciesIndexForConservedMoietyId(std::string id) constrrllvm::LLVMModelDataSymbols
getInitBoundarySpeciesSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getInitCompartmentSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getInitFloatingSpeciesSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getInitGlobalParameterSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getInitialAssignmentIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getModelName() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getNamedSpeciesReferenceInfo(const std::string &id) (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getRateRuleId(size_t indx) constrrllvm::LLVMModelDataSymbols
getRateRuleIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getRateRuleIndex(std::string const &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getRateRuleSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getReactionIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getReactionIndex(std::string const &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getReactionSize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getStoichColIndx() constrrllvm::LLVMModelDataSymbols
getStoichiometryIds() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getStoichiometryIndex(std::string const &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getStoichiometryIndex(const std::string &, const std::string &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getStoichiometryList() constrrllvm::LLVMModelDataSymbols
getStoichiometrySize() const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
getStoichRowIndx() constrrllvm::LLVMModelDataSymbols
getSymbolIndex(const std::string &name, int &result) constrrllvm::LLVMModelDataSymbols
GLOBAL_PARAMETER enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
hasAssignmentRule(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
hasInitialAssignmentRule(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
hasRateRule(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
INVALID_SYMBOL enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isBoundarySpecies(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isConservedMoietyAnalysis() constrrllvm::LLVMModelDataSymbols
isConservedMoietyParameter(uint id) constrrllvm::LLVMModelDataSymbols
isConservedMoietySpecies(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
isConservedMoietySpecies(uint id, uint &result) constrrllvm::LLVMModelDataSymbols
isIndependentBoundarySpecies(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isIndependentCompartment(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isIndependentElement(const std::string &id) constrrllvm::LLVMModelDataSymbols
isIndependentFloatingSpecies(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isIndependentGlobalParameter(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isIndependentInitBoundarySpecies(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
isIndependentInitCompartment(const std::string &symbol) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isIndependentInitElement(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
isIndependentInitFloatingSpecies(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
isIndependentInitGlobalParameter(const std::string &symbol) constrrllvm::LLVMModelDataSymbols
isIndependentInitGlobalParameter(size_t id) constrrllvm::LLVMModelDataSymbols
isNamedSpeciesReference(const std::string &id) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
isRateRuleGlobalParameter(uint gid) constrrllvm::LLVMModelDataSymbols
LLVMModelDataSymbols() (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
LLVMModelDataSymbols(libsbml::Model const *model, unsigned options) (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
LLVMModelDataSymbols(std::istream &in) (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
loadState(std::istream &) (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
Modifier enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
MultiReactantProduct enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
print() constrrllvm::LLVMModelDataSymbols
Product enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
Reactant enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
REACTION enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
saveState(std::ostream &) const (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
SpeciesReferenceType enum name (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
STOICHIOMETRY enum value (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
StringUIntMap typedef (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
StringUIntPair typedef (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
StringUIntVectorMap typedef (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
SymbolIndexType enum namerrllvm::LLVMModelDataSymbols
UIntUIntMap typedef (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbols
~LLVMModelDataSymbols() (defined in rrllvm::LLVMModelDataSymbols)rrllvm::LLVMModelDataSymbolsvirtual